Crystal structure of phosphoglucose isomerase from pig muscle and its complex with 5-phosphoarabinonate. Structure of native phosphoglucose isomerase from rabbit: A total of 17 residues are completely conserved among these 11 sequences, including the metal-binding site His88, His90, His, and Glu97; PfcPGI numbering 4 , 30 , The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Crystal structure of rabbit phosphoglucose isomerase, a glycolytic enzyme that moonlights as neuroleukin, autocrine motility factor, and differentiation mediator. The latter assay was routinely used for most PGI activity determinations.

The Applied Statistics course which I followed covers all the major areas of Statistics and its applications. Sequence comparison suggested the presence of few putative cPGI homologs; however, none of them have been characterized 44 , The vials were then cooled on ice for 5 min, and the residual enzyme activity was tested and compared to the controls unheated samples. Generally, divalent metals were inhibitory at higher millimolar concentrations. Crystal structure of human homogentisate dioxygenase. This includes all proteobacteria, especially Agrobacterium tumefaciens and S. Molecular, kinetic, thermophilic, and inhibitory properties were analyzed and compared.

Molecular, kinetic, thermophilic, and inhibitory properties were analyzed and compared. Janani de Silva M. Phosphoglucose isomerase from Escherichia coli K Home About Courses Ph.

In sedimentation velocity experiments the apparent sedimentation coefficient s app 20,W and an approximated molecular mass were evaluated from the velocity and shape of the sedimenting boundary by fitting the time-dependent concentration profiles calculated with Lamm’s differential equation for a single sedimenting species to the measured data by using the program package Thess Journal List J Bacteriol v.


pgis thesis format

The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. All V max values given correspond to the purification procedure described.

Two consensus sequences for the novel cPGI family were derived. Recently, a novel type of PGI has been identified and characterized from the hyperthermophilic euryarchaeon Pyrococcus furiosus 2252 and later from the closely related Thermococcus litoralis Salmonella enterica serovar Typhimurium. Sequence comparison and phylogenetic affiliation.

Thus, for the respective proteobacterial cpgi genes, a lateral gene transfer from euryarchaeal species has to be assumed, since a loss of this gene in almost all bacteria appears to be unlikely. For the stcpgi gene, a lateral gene transfer has to be assumed after the lines of S.

Crystal structure of human homogentisate dioxygenase. Under these conditions activity remained about constant.

pgis thesis format

PGI plays a central role in sugar metabolism of eukarya, bacteria, and archaea, both in glycolysis via the Embden-Meyerhof pathway in eukarya and bacteria and in its modified versions found in archaea. Open in a separate window. F6P, fructosephosphate; G6P, glucosephosphate.

Expression of the pfcpgi from the T7 promoter was more than five times higher than from the araC promoter see reference The PGI superfamily is found in all three domains—archaea, bacteria, and eukarya—and probably has been present in the last common ancestor as well. When the measured concentration profile of sedimentation-diffusion equilibrium runs remained unchanged for 12 h, we assumed equilibrium to be attained.

Pgis thesis format outline

Multiple sequence alignment of amino acid sequences of the cPGI family. I really valued the support and encouragement received from lecturers and my colleagues. The mtl genes and the mannitolphosphate dehydrogenase from Klebsiella pneumoniae KAY Structure of oxalate decarboxylase from Bacillus subtilis ogis 1. Thus far this family comprises nine euryarchaeal and two proteobacterial sequences.


Lateral gene transfers have been suggested for several conventional pgi genes 263144e. Their presence is presumably the result of a lateral gene transfer from a Thermococcus -like species after the lines of E. One might speculate that the proteobacterial cPGIs might be more relevant at higher temperatures in the respective organisms. Moreover, the presence of a divalent metal, most likely iron, as deduced from the crystal structure of PfcPGI bound with 6-phosphogluconate is a prerequisite in the recently proposed hydride transfer mechanism of PfcPGI The inserted gene sequences were confirmed on each strand by the method of Sanger et al.

Pgis thesis format outline – College Students Essay

Not surprisingly, cPGI family sequences cannot be divided into a bacterial and an euryarchaeal cluster but rather into two or three subfamilies: Spectra were recorded before and after each temperature gradient.

All other bacterial genomes thus far appear to contain only a conventional PGI. For His-tagged cPGIs, to correct for unspecific metal binding by the respective His tags as well as for H 2 O impurities, His-tagged glucosephosphate dehydrogenase from T.